MTI-R01_0114/README.md
2023-08-17 00:00:00 +09:00

2.3 KiB

Marmoset Tracer-Injection [R01_0114]

Authors: Akiya Watakabe1*, Henrik Skibbe2

  1. Laboratory for Molecular Analysis of Higher Brain Function, RIKEN Center for Brain Science
  2. Brain Image Analysis Unit, RIKEN Center for Brain Science

*corresponding authors: Akiya Watakabe (akiya.watakabe@riken.jp)

DATASET DESCRIPTION

This dataset contains TissueCyte images produced during tracer injection experiment on Marmoset R01_0114

  • Microscopy images and annotations: Akiya Watakabe.
  • Image post-processing: Henrik Skibbe.

For more details see https://dataportal.brainminds.jp/marmoset-tracer-injection

EXPERIMENT METADATA

Brain/MINDS ID R01_0114
Group Yamamori
Lab identifier TT81
Region of injection A25
Side of injection left
Summary A25 injection (+ 14C); robust basal forebrain, amygdala and temporal cortex projections.
Known issues Low tissue background signal. May contain some AAV spread into the septum. Labels can be confirmed in fimbria and stria terminalis.
Age 9.8
Sex F
Body weight (g) 338
Date of birth 20100126
Injection date 20190913
Survival period (day) 28
 Tracer 1 (thy1-tTA 1/TRE-clover 1/TRE-Vamp2mPFC 0.25)x10e12 vg/ml
 Direction anterograde
 Method 0.2ul x 1 (@ 7.4 mm) 5min
 Tracer 2 AAV2retro-EF1-cre: 1.5x10e12 vg/ml
 Injection Site Coinjection with tracer 1
 Direction retro
 Tracer 3 10 % BDA
 Injection Site contra/A10
 Direction antero
 Method 0.2µl/5min x1
 Tracer 4 CamKII-smFP-myc (CamKII-smFP-myc 3.7x10e12 vg/ml)
 Injection Site contra/A24bc (leak to A14)
 Direction antero
 Method 0.2 µl/5 min @ 0.7 mm
 Tracer 5 TET-smFP-FLAG (thy1-tTA 1/TRE-smFP-FLAG 1)x10e12 vg/ml
 Injection Site contra/A24 (leak to A14)
 Direction antero
 Method 0.2ul x 1 5min
 Tracer 6 AAV2retro-smFP-HA.H2B(AAV2retro-CAG-smFP-HA.H2B 3.7x10e12 vg/ml)
 Injection Site coinjected with tracer 4
 Direction retro

CONTENT

File name Description
NN_tracer/
c2_50mu/
labels/
c1_50mu/
c3_50mu/
Backlit_slices/
Nissl_slices/