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Marmoset Tracer Injection – Image set [MTI-R01_0040]
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README.md

Marmoset Tracer-Injection [R01_0040]

Authors: Akiya Watakabe1*, Henrik Skibbe2

  1. Laboratory for Molecular Analysis of Higher Brain Function, RIKEN Center for Brain Science
  2. Brain Image Analysis Unit, RIKEN Center for Brain Science

*corresponding authors: Akiya Watakabe (akiya.watakabe@riken.jp)

DATASET DESCRIPTION

This dataset contains TissueCyte images produced during tracer injection experiment on Marmoset R01_0040

  • Microscopy images and annotations: Akiya Watakabe.
  • Image post-processing: Henrik Skibbe.

For more details see https://dataportal.brainminds.jp/marmoset-tracer-injection

EXPERIMENT METADATA
Brain/MINDS ID R01_0040
Group Yamamori
Lab identifier TT28
Region of injection A8aV
Side of injection left
Summary A8aV injection: small injection (appox. 3-400um). Labeling is not bad.
Known issues Smaller than other samples (appox. 3-400um).
Age 5.6
Sex M
Body weight (g) 378
Date of birth 20110105
Injection date 20160801
Survival period (day) 29
 Tracer 1 (thy1-tTA 1/TRE-clover 1/TRE-Vamp2mPFC 0.25)x10e12 vg/ml
 Direction anterograde
 Method 0.1ul x 1 (@ 1mm)/5min
 Tracer 2 5% BDA
 Injection Site contra-parietal
 Direction antero
 Method 1ul/10min

CONTENT

File name Description
NN_tracer/
c2_50mu/
labels/
c1_50mu/
c3_50mu/
Backlit_slices/
Nissl_slices/

Note: Color lookup table used in atlas region labels slices can be found here.