brainminds/MTI-R01_0071
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity Actions

initial release

Browse source
This commit is contained in:
brainminds 2021-12-27 00:00:00 +09:00
parent 7a33a56f13
commit 3756d19ab0
2626 changed files with 2682 additions and 0 deletions
Download patch file Download diff file Expand all files Collapse all files

56
README.md Normal file
View file

@ -0,0 +1,56 @@
# Marmoset Tracer-Injection [R01_0071]
Authors: Akiya Watakabe<sup>1</sup>*, Henrik Skibbe<sup>2</sup>
1. Laboratory for Molecular Analysis of Higher Brain Function, RIKEN Center for Brain Science
2. Brain Image Analysis Unit, RIKEN Center for Brain Science
*corresponding authors: Akiya Watakabe (akiya.watakabe@riken.jp)
## DATASET DESCRIPTION
This dataset contains **TissueCyte** images produced during **tracer injection** experiment on Marmoset **R01_0071**
* Microscopy images and annotations: Akiya Watakabe.
* Image post-processing: Henrik Skibbe.
For more details see https://dataportal.brainminds.jp/marmoset-tracer-injection
## EXPERIMENT METADATA
|||
|----|-----|
|Brain/MINDS ID|R01_0071|
|Group|Yamamori|
|Lab identifier|TT48|
|Region of injection|A9|
|Side of injection|left|
|Summary|A9 injection. ("med')|
|Known issues|Sectioning artifact/ 372 and 373 were completely lost. 372-379, more or less affected.|
|Age|7.8|
|Sex|M|
|Body weight (g)|445|
|Date of birth|20091214|
|Injection date|20170904|
|Survival period (day)|30|
|&#x00A0;Tracer **1** |(thy1-tTA 1/TRE-clover 1/TRE-Vamp2mPFC 0.25)x10e12 vg/ml|
|&#x00A0;Direction|anterograde|
|&#x00A0;Method|0.1ul x 2 (@ 0.8 and 1.2mm) 5min each|
|&#x00A0;Tracer **2** |10 % BDA|
|&#x00A0;Injection Site|contra-MT|
|&#x00A0;Direction|antero|
|&#x00A0;Method|0.5ul/5minx2|
## TERMS OF USE
see https://dataportal.brainminds.jp/marmoset-tracer-injection/terms-of-use
## CONTENT
| File name | Description |
| ---- | ---- |
|[`NN_tracer`](NN_tracer)/||
|[`c2_50mu`](c2_50mu)/||
|[`labels`](labels)/||